PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28659-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 182aa    MW: 19507.6 Da    PI: 8.7257
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28659-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.23.2e-0758852048
                     TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48
                     G+  W++ ++  g++R++k+c++rw +yl
  TRIUR3_28659-P1 58 GTA-WRALPKQAGLTRCGKSCRLRWINYL 85
                     555.***********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-105788IPR009057Homeodomain-like
PfamPF002491.4E-55885IPR001005SANT/Myb domain
SuperFamilySSF466896.13E-1260113IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.5E-889114IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MRKISALKNP GAKGIRRAAG EGSIEWDVRR PAAWGSPSSA RGCGRPRRTR SSTTTSSGTA  60
WRALPKQAGL TRCGKSCRLR WINYLRPDLK RGCFSQEEED HIVALHQILG NRFAEDLGAA  120
NAAALYGQFY GGKEAADEDA GFGAADYSCV LDVPESLGYG ESSSNSSNRN YGGEVGSMLD  180
GE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM0669461e-102KM066946.1 Triticum aestivum R2R3-MYB transcription factor (MYB86) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotP200279e-29MYB3_HORVU; Myb-related protein Hv33
TrEMBLT1NDN01e-131T1NDN0_TRIUA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.14e-27myb domain protein 15